Show simple item record

dc.contributor.authorAlanezi, Saleh T
dc.contributor.authorKrasny, Marcin Jan
dc.contributor.authorKleefeld, Christoph
dc.contributor.authorColgan, Niall
dc.date.accessioned2025-01-06T14:18:00Z
dc.date.available2025-01-06T14:18:00Z
dc.date.issued2024-06-06
dc.identifier.citationAlanezi, S. T., Krasney, M. J., Kleefeld, C. and Colgan, N. (2024) 'Differential Diagnosis of Prostate Cancer Grade to Augment Clinical Diagnosis Based on Classifier Models with Tuned Hyperparameters', Cancers, 16(11), 2163. Available at: https://doi.org/10.3390/cancers16112163en_US
dc.identifier.issn2072-6694
dc.identifier.urihttps://research.thea.ie/handle/20.500.12065/4874
dc.description.abstractWe developed a novel machine-learning algorithm to augment the clinical diagnosis of prostate cancer utilizing first and second-order texture analysis metrics in a novel application of machine-learning radiomics analysis. We successfully discriminated between significant prostate cancers versus non-tumor regions and provided accurate prediction between Gleason score cohorts with statistical sensitivity of 0.82, 0.81 and 0.91 in three separate pathology classifications. Tumor heterogeneity and prediction of the Gleason score were quantified using two feature selection approaches and two separate classifiers with tuned hyperparameters. There was a total of 71 patients analyzed in this study. Multiparametric MRI, incorporating T2WI and ADC maps, were used to derive radiomics features. Recursive feature elimination (RFE), the least absolute shrinkage and selection operator (LASSO), and two classification approaches, incorporating a support vector machine (SVM) (with randomized search) and random forest (RF) (with grid search), were utilized to differentiate between non-tumor regions and significant cancer while also predicting the Gleason score. In T2WI images, the RFE feature selection approach combined with RF and SVM classifiers outperformed LASSO with SVM and RF classifiers. The best performance was achieved by combining LASSO and SVM into a model that used both T2WI and ADC images. This model had an area under the curve (AUC) of 0.91. Radiomic features computed from ADC and T2WI images were used to predict three groups of Gleason score using two kinds of feature selection methods (RFE and LASSO), RF and SVM classifier models with tuned hyperparameters. Using combined sequences (T2WI and ADC map images) and combined radiomics (1st and GLCM features), LASSO, with a feature selection method with RF, was able to predict G3 with the highest sensitivity at a level AUC of 0.92. To predict G3 for single sequence (T2WI images) using GLCM features, LASSO with SVM achieved the highest sensitivity with an AUC of 0.92.en_US
dc.formatapplication/pdfen_US
dc.language.isoengen_US
dc.publisherMDPIen_US
dc.relation.ispartofCancersen_US
dc.rightsAttribution 4.0 International*
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/*
dc.subjectprostate canceren_US
dc.subjectmultiparametric (mp-MRI)en_US
dc.subjectmachine learningen_US
dc.titleDifferential Diagnosis of Prostate Cancer Grade to Augment Clinical Diagnosis Based on Classifier Models with Tuned Hyperparametersen_US
dc.typeinfo:eu-repo/semantics/articleen_US
dc.contributor.affiliationTechnological University of the Shannon: Midlands Midwesten_US
dc.description.peerreviewyesen_US
dc.identifier.doi10.3390/cancers16112163en_US
dc.identifier.issue11en_US
dc.identifier.orcidhttps://orcid.org/0000-0002-6482-0601en_US
dc.identifier.startpage2163en_US
dc.identifier.volume16en_US
dc.rights.accessrightsinfo:eu-repo/semantics/openAccessen_US
dc.subject.departmentDepartment of Civil Engineering and Tradesen_US
dc.type.versioninfo:eu-repo/semantics/publishedVersionen_US


Files in this item

Thumbnail
Thumbnail

This item appears in the following Collection(s)

Show simple item record

Attribution 4.0 International
Except where otherwise noted, this item's license is described as Attribution 4.0 International